M.Sc. in
Bioinformatics, Center of Bioinformatics, University of Allahabad, Prayagraj, UP
Area of Interest:
Deep learning, Computational Regulomics and Epigenomics, and Big Data Analytics.
Publications:
† Equally contributed * Corresponding Author
miWords: Transformers based composite deep-learning for highly accurate discovery of pre-miRNA regions across plant genomes Sagar Gupta†, Ravi Shankar*
Briefings in Bioinformatics, 2023Read research article here
DeepPlnc: Bi-modal Deep Learning for Highly Accurate Plant lncRNA Discovery
Ritu†, Sagar Gupta†, Nitesh Kumar Sharma, Ravi Shankar*
Genomics, 2022 Read research article here
RBPSpot: Learning on Appropriate Contextual Information for RBP Binding Sites Discovery
Nitesh Kumar Sharma†, Sagar Gupta, Prakash Kumar, Ashwani Kumar, Upendra Kumar Pradhan, Ravi Shankar*
iScience, 2021 Read research article here
miRbiom: Machine-Learning on Bayesian Causal Nets of RBP-miRNA interactions successfully predicts miRNA profiles
Upendra Kumar Pradhan†, Nitesh Kumar Sharma†, Prakash Kumar, Ashwani Kumar, Sagar Gupta, Ravi Shankar*
PLoS ONE, 2021 Read research article here
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