M.Sc. in Bioinformatics, Center of Bioinformatics, University of Allahabad, Prayagraj, UP

Epigenomics, Big Data Analytics, Molecular Docking, and Molecular Dynamics.

Publications:

1. DMRU: Generative Deep-Learning to unravel condition specific cytosine methylation in plants
   Sagar Gupta, Anchit Kumar, Veerbhan Kesarwani, Ravi Shankar*
   bioRxiv, 2025  Read research article here


2. Genome wide identification of WUSHEL-related homeobox genes reveal their differential regulation during cold stress and in vitro organogenesis in Picrorhiza kurrooa
   Jhilmil Nath, Shubham Joshi, Sagar Gupta, Veerbhan Kesarwani, Ravi Shankar and Rohit Joshi*
   In Vitro Cellular & Developmental Biology - Plant, 2024 Read research article here


3. PTFSpot: deep co-learning on transcription factors and their binding regions attains impeccable universality in plants
   Sagar Gupta, Veerbhan Kesarwani, Umesh Bhati, Jyoti, Ravi Shankar*
   Briefings in Bioinformatics, 2024  Read research article here


4. PTF-Vac: Ab-initio discovery of plant transcription factors binding sites using explainable and generative deep co-learning encoders-decoders
   Sagar Gupta, Umesh Bhati, Jyoti, Veerbhan Kesarwani, Akanksha Sharma, Ravi Shankar*
   bioRxiv, 2024  Read research article here


5. Nutritional quality and microbial diversity of Chhurpe from different milk sources - An ethnic fermented food of high-altitude regions of the Western Himalayas
   Sahdev Choudhary^†, Kumari Shanu^†, Athrinandan S Hegde^†, Veerbhan Kesarwani, Raman Kumar, Ravi Shankar*, Sarita Devi*, Vidyashankar Srivatsan*
   Discover Food, 2024  Read research article here 


6. Flavonoids from Aerial Parts of Cissampelos pareira L. as Antimalarial Agents: Computational Validation of Ethnopharmacological Relevance
   Patil Shivprasad Suresh^†, Veerbhan Kesarwani^†, Surekha Kumari, Ravi Shankar*, Upendra Sharma*
   South African Journal of Botany, 2023  Read research article here


7. Bisbenzylisoquinolines from Cissampelos pareira L. as Antimalarial Agents: Molecular Docking, Pharmacokinetics Analysis, and Molecular Dynamic Simulation Studies
   Patil Shivprasad Suresh^†, Veerbhan Kesarwani^†, Surekha Kumari, Ravi Shankar*, Upendra Sharma*
   Computational Biology and Chemistry, 2023  Read research article here