M.Sc. Bioinformatics, Central University of Punjab, Bathinda,Punjab

Transcription factors.

Publications:

1. Conference Poster: Decoding Plant TF-DNA Interactions Using PTFSpot and PTF-Vac: A Universal and Data-Independent Deep Learning Approach
   Sagar Gupta, Jyoti, Umesh Bhati, Veerbhan Kesarwani, Akanksha Sharma, Ravi Shankar*
   22nd Horizons in Molecular Biology Symposium, Max Planck Institute for Multidisciplinary Sciences, Gottingen, Germany, 2025  Find the conference poster here


2. Conference Poster: The Genomics Armoury @ The Himalayan Centre for High-throughput Computational Biology
   Sagar Gupta, Umesh Bhati, Jyoti, Veerbhan Kesarwani, Akanksha Sharma, Anchit Kumar, Ravi Shankar*
   Genomics India Conference, IISc, Bengaluru, 2025  Find the conference poster here


3. PTF-Vac: Ab-initio discovery of plant transcription factors binding sites using explainable and generative deep co-learning encoders-decoders
   Sagar Gupta, Jyoti, Umesh Bhati, Veerbhan Kesarwani, Akanksha Sharma, Ravi Shankar*
   Plant Communications (Accepted), 2025  Read the research article here


4. Comprehensive analysis of computational approaches in plant transcription factors binding regions discovery
   Jyoti, Ritu, Sagar Gupta, Ravi Shankar*
   Heliyon, 2024  Read the research article here 


5. PTFSpot: deep co-learning on transcription factors and their binding regions attains impeccable universality in plants
   Sagar Gupta, Veerbhan Kesarwani, Umesh Bhati, Jyoti, Ravi Shankar*
   Briefings in Bioinformatics, 2024  Read the research article here