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About IHBT

Research

Software & Web server

GitHub

Workshop/Conference

Career

Friday May 22, 2026 1:29:40 am

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Research

Software & Web server

Lab Members

Publications

Workshop/Conference

GitHub

Careers

Qualification:

M.Sc. Human Genomics, Chandigarh

Area of Interest:

Computional biology and webserver designing

Publications:

† Equally contributed * Corresponding Author

Decoding stress specific transcriptional regulation by causality aware Graph-Transformer deep learning
Umesh Bhati, Akanksha Sharma, Sagar Gupta, Anchit Kumar, Upendra Kumar Pradhan, Ravi Shankar*
Current Plant Biology, 2025 Read the research article here

PTF-Vāc: An explainable and generative deep co-learning encoders-decoders system for ab-initio discovery of plant transcription factor binding sites
Sagar Gupta, Jyoti, Umesh Bhati, Veerbhan Kesarwani, Akanksha Sharma, Ravi Shankar*
Plant Communications, 2025 Read the research article here

Conference Poster: Deep-Learning on condition specific expression profiles reveal critical cytosines in gene regulation
Veerbhan Kesarwani, Anchit Kumar, Akanksha Sharma, Sagar Gupta, Ravi Shankar*
Plant evolution: from origins to diversification on land,
Gregor Mendel Institute for Molecular Plant Biology, Vienna, Austria, 2025
Find the conference poster here

Conference Poster: Decoding stress specific transcriptional regulation by causality aware Graph-Transformer deep learning
Umesh Bhati, Akanksha Sharma, Sagar Gupta, Anchit Kumar, Upendra Kumar Pradhan, Ravi Shankar*
22nd Horizons in Molecular Biology Symposium,
Max Planck Institute for Multidisciplinary Sciences, Gottingen, Germany, 2025
Find the conference poster here

Conference Poster: Decoding Plant TF-DNA Interactions Using PTFSpot and PTF-Vac: A Universal and Data-Independent Deep Learning Approach
Sagar Gupta, Jyoti, Umesh Bhati, Veerbhan Kesarwani, Akanksha Sharma, Ravi Shankar*
22nd Horizons in Molecular Biology Symposium,
Max Planck Institute for Multidisciplinary Sciences, Gottingen, Germany, 2025
Find the conference poster here

Conference Poster: The Genomics Armoury @ The Himalayan Centre for High-throughput Computational Biology
Sagar Gupta, Umesh Bhati, Jyoti, Veerbhan Kesarwani, Akanksha Sharma, Anchit Kumar, Ravi Shankar*
Genomics India Conference, IISc, Bengaluru, 2025 Find the conference poster here

Explainable Deep-Learning on condition specific expression profiles reveals critical cytosines in gene regulation
Veerbhan Kesarwani, Anchit Kumar, Akanksha Sharma, Sagar Gupta, Kirti Pandey, Gaurav Zinta, Ravi Shankar*
bioRxiv, 2026 Read the research article here

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