M.Tech. in Biochemical Engineering, IIT-BHU, Varanasi, UP

Computational network biology

Publications:

1. Decoding stress specific transcriptional regulation by causality aware Graph-Transformer deep learning
   Umesh Bhati, Akanksha Sharma, Sagar Gupta, Anchit Kumar, Upendra Kumar Pradhan, Ravi Shankar*
   bioRxiv, 2025  Read research article here


2. PTFSpot: deep co-learning on transcription factors and their binding regions attains impeccable universality in plants
   Sagar Gupta, Veerbhan Kesarwani, Umesh Bhati, Jyoti, Ravi Shankar*
   Briefings in Bioinformatics, 2024  Read research article here



3. PTF-Vac: Ab-initio discovery of plant transcription factors binding sites using explainable and generative deep co-learning encoders-decoders
   Sagar Gupta, Jyoti, Umesh Bhati, Veerbhan Kesarwani, Akanksha Sharma, Ravi Shankar*
   bioRxiv, 2024  Read research article here