Conference Talk: p-TAREF2.0: Employing deep learning for reliable miRNA target identification in plants

Anchit Kumar#, Sagar Gupta, Umesh Bhati, Jyoti, Ravi Shankar*

ICCBB, The University of Tokyo, Tokyo, Japan, 2025
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Conference Talk: Decoding stress specific transcriptional regulation by causality aware Graph-Transformer deep learning

Umesh Bhati#, Akanksha Sharma, Sagar Gupta, Anchit Kumar, Upendra Kumar Pradhan, Ravi Shankar*

JXB 75th Anniversary Conference, Edinburgh, United Kingdom, 2025
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Conference Poster: Comprehensive analysis of computational approaches in plant transcription factors binding regions discovery

Jyoti#, Ritu, Sagar Gupta, Ravi Shankar*

GIW XXXIV ISCB-Asia,
International Conference on Genome Informatics ISCB-Asia, The University of hong Kong,
Hong Kong, 2025
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Conference Poster: DMRU: Generative Deep-Learning to unravel condition specific cytosine methylations in plants

Sagar Gupta#, Anchit Kumar, Veerbhan Kesarwani, Umesh Bhati, Ravi Shankar*

GIW XXXIV ISCB-Asia,
International Conference on Genome Informatics ISCB-Asia, The University of hong Kong,
Hong Kong, 2025
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Conference Poster: Deep-Learning on condition specific expression profiles reveal critical cytosines in gene regulation

Veerbhan Kesarwani#, Anchit Kumar, Akanksha Sharma, Sagar Gupta, Ravi Shankar*

Plant evolution: from origins to diversification on land,
Gregor Mendel Institute for Molecular Plant Biology,
Vienna, Austria, 2025
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Conference Poster: Decoding stress specific transcriptional regulation by causality aware Graph-Transformer deep learning

Umesh Bhati#, Akanksha Sharma, Sagar Gupta, Anchit Kumar, Upendra Kumar Pradhan, Ravi Shankar*

22nd Horizons in Molecular Biology Symposium,
Max Planck Institute for Multidisciplinary Sciences,
Gottingen, Germany, 2025
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Conference Poster: Decoding Plant TF-DNA Interactions Using PTFSpot and PTF-Vac: A Universal and Data-Independent Deep Learning Approach

Sagar Gupta#, Jyoti, Umesh Bhati, Veerbhan Kesarwani, Akanksha Sharma, Ravi Shankar*

22nd Horizons in Molecular Biology Symposium,
Max Planck Institute for Multidisciplinary Sciences,
Gottingen, Germany, 2025
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Conference Poster: The Genomics Armoury @ The Himalayan Centre for High-throughput Computational Biology

Sagar Gupta#, Umesh Bhati, Jyoti, Veerbhan Kesarwani, Akanksha Sharma, Anchit Kumar, Ravi Shankar*

Genomics India Conference, IISc, Bengaluru, 2025
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Conference Presentation: Decoding Transcriptional Regulation in Plants: Through the Eyes of AI

Ravi Shankar#

Genomics India Conference, IISc, Bengaluru, 2025